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SDHC succinate dehydrogenase complex subunit C [ Bubalus bubalis (water buffalo) ]

Gene ID: 102394201, updated on 26-Jun-2024

Summary

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Gene symbol
SDHC
Gene description
succinate dehydrogenase complex subunit C
See related
EnsemblRapid:ENSBALG00030033066
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SDHC in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (8284343..8314335, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (8108239..8138235, complement)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene cilia and flagella associated protein 126 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene uncharacterized LOC112585521 Neighboring gene myelin protein zero Neighboring gene 60S ribosomal protein L9 Neighboring gene Purkinje cell protein 4 like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase cytochrome b560 subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    8284343..8314335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025287484.3 → XP_025143269.2  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X3

    Related
    ENSBALP00030060886.1, ENSBALT00030091469.1
    Conserved Domains (1) summary
    cd03499
    Location:65 → 94
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...

  2. XM_006048458.4 → XP_006048520.3  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1

    Related
    ENSBALP00030060907.1, ENSBALT00030091495.1
    Conserved Domains (1) summary
    cd03499
    Location:65 → 183
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...

  3. XM_025287483.3 → XP_025143268.2  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X2

    Related
    ENSBALP00030060915.1, ENSBALT00030091504.1
    Conserved Domains (1) summary
    cd03499
    Location:31 → 149
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...
Nucleotide Protein
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