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GYG2 glycogenin 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102394095, updated on 10-Mar-2024

Summary

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Gene symbol
GYG2
Gene description
glycogenin 2
See related
EnsemblRapid:ENSBALG00030019280
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human all
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Genomic context

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See GYG2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) X NC_059181.1 (1363003..1397694)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) X NC_058367.1 (1367850..1402616)

Chromosome X - NC_059181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102395359 Neighboring gene CD99 molecule (Xg blood group) Neighboring gene Xg glycoprotein (Xg blood group) Neighboring gene arylsulfatase D Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene arylsulfatase L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059181.1 Reference NDDB_SH_1 Primary Assembly

    Range
    1363003..1397694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044936716.2 → XP_044792651.2  glycogenin-2 isoform X7

  2. XM_044936714.2 → XP_044792649.2  glycogenin-2 isoform X5

  3. XM_044936710.2 → XP_044792645.2  glycogenin-2 isoform X1

  4. XM_044936712.2 → XP_044792647.2  glycogenin-2 isoform X3

  5. XM_044936713.2 → XP_044792648.2  glycogenin-2 isoform X4

  6. XM_044936711.2 → XP_044792646.2  glycogenin-2 isoform X2

  7. XM_044936715.2 → XP_044792650.2  glycogenin-2 isoform X6

  8. XM_025277059.3 → XP_025132844.3  glycogenin-2 isoform X8

  9. XM_025277060.3 → XP_025132845.3  glycogenin-2 isoform X8

    Related
    ENSBALP00030036314.1, ENSBALT00030054097.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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