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ALPL alkaline phosphatase, biomineralization associated [ Bubalus bubalis (water buffalo) ]

Gene ID: 102393873, updated on 10-Mar-2024

Summary

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Gene symbol
ALPL
Gene description
alkaline phosphatase, biomineralization associated
See related
EnsemblRapid:ENSBALG00030012641
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See ALPL in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 2 NC_059158.1 (183209364..183273121, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 2 NC_058344.1 (182053083..182122766, complement)

Chromosome 2 - NC_059158.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene ubiquitin specific peptidase 48 Neighboring gene RAP1 GTPase activating protein Neighboring gene U6 spliceosomal RNA Neighboring gene endothelin converting enzyme 1 Neighboring gene uncharacterized LOC123332242 Neighboring gene uncharacterized LOC123332243

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alkaline phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline phosphatase, tissue-nonspecific isozyme
Names
alkaline phosphatase, liver/bone/kidney

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059158.1 Reference NDDB_SH_1 Primary Assembly

    Range
    183209364..183273121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025278772.3 → XP_025134557.1  alkaline phosphatase, tissue-nonspecific isozyme

    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  2. XM_006048546.4 → XP_006048608.1  alkaline phosphatase, tissue-nonspecific isozyme

    See identical proteins and their annotated locations for XP_006048608.1

    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  3. XM_006048547.4 → XP_006048609.1  alkaline phosphatase, tissue-nonspecific isozyme

    See identical proteins and their annotated locations for XP_006048609.1

    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  4. XM_006048545.4 → XP_006048607.1  alkaline phosphatase, tissue-nonspecific isozyme

    See identical proteins and their annotated locations for XP_006048607.1

    Related
    ENSBALP00030023849.1, ENSBALT00030035356.1
    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase

  5. XM_025278773.3 → XP_025134558.1  alkaline phosphatase, tissue-nonspecific isozyme

    Conserved Domains (1) summary
    pfam00245
    Location:51 → 490
    Alk_phosphatase; Alkaline phosphatase
Nucleotide Protein
Heading Accession and Version

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