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ASB8 ankyrin repeat and SOCS box containing 8 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102393635, updated on 10-Mar-2024

Summary

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Gene symbol
ASB8
Gene description
ankyrin repeat and SOCS box containing 8
See related
EnsemblRapid:ENSBALG00030021287
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See ASB8 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (88149778..88158337, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (87072087..87080640, complement)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 1 Neighboring gene phosphofructokinase, muscle Neighboring gene ERO1-like protein alpha Neighboring gene coiled-coil domain containing 184

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    88149778..88158337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025284059.3 → XP_025139844.1  ankyrin repeat and SOCS box protein 8 isoform X1

    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]

  2. XM_006042763.4 → XP_006042825.1  ankyrin repeat and SOCS box protein 8 isoform X1

    See identical proteins and their annotated locations for XP_006042825.1

    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]

  3. XM_025284060.3 → XP_025139845.1  ankyrin repeat and SOCS box protein 8 isoform X2

    Conserved Domains (3) summary
    cd03727
    Location:184 → 225
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:24 → 54
    ANK; ANK repeat [structural motif]
    cl39094
    Location:8 → 120
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_006042764.4 → XP_006042826.1  ankyrin repeat and SOCS box protein 8 isoform X1

    See identical proteins and their annotated locations for XP_006042826.1

    Related
    ENSBALP00030040282.1, ENSBALT00030059737.1
    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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