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CHST14 carbohydrate sulfotransferase 14 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102393351, updated on 10-Mar-2024

Summary

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Gene symbol
CHST14
Gene description
carbohydrate sulfotransferase 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See CHST14 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 11 NC_059167.1 (67208620..67210817, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 11 NC_058353.1 (66536255..66538452, complement)

Chromosome 11 - NC_059167.1Genomic Context describing neighboring genes Neighboring gene RNA pseudouridine synthase domain containing 2 Neighboring gene coiled-coil domain containing 32 Neighboring gene bromo adjacent homology domain containing 1 Neighboring gene isovaleryl-CoA dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate proteoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059167.1 Reference NDDB_SH_1 Primary Assembly

    Range
    67208620..67210817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006073047.3 → XP_006073109.2  carbohydrate sulfotransferase 14

    Conserved Domains (1) summary
    pfam03567
    Location:144 → 364
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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