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MAG myelin associated glycoprotein [ Bubalus bubalis (water buffalo) ]

Gene ID: 102392690, updated on 10-Mar-2024

Summary

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Gene symbol
MAG
Gene description
myelin associated glycoprotein
See related
EnsemblRapid:ENSBALG00030028115
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See MAG in Genome Data Viewer
Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 18 NC_059174.1 (45641877..45658314)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 18 NC_058360.1 (45617993..45634430)

Chromosome 18 - NC_059174.1Genomic Context describing neighboring genes Neighboring gene upstream transcription factor 2, c-fos interacting Neighboring gene hepcidin antimicrobial peptide Neighboring gene CD22 molecule Neighboring gene free fatty acid receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
myelin-associated glycoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059174.1 Reference NDDB_SH_1 Primary Assembly

    Range
    45641877..45658314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044932228.1 → XP_044788163.1  myelin-associated glycoprotein isoform X3

    Related
    ENSBALP00030052384.1, ENSBALT00030078216.1

  2. XM_006068818.3 → XP_006068880.1  myelin-associated glycoprotein isoform X1

    See identical proteins and their annotated locations for XP_006068880.1

    Conserved Domains (5) summary
    smart00409
    Location:333 → 409
    IG; Immunoglobulin
    cd00096
    Location:239 → 242
    Ig; Ig strand A [structural motif]
    cd05712
    Location:22 → 138
    IgV_CD33; Immunoglobulin Variable (IgV) domain at the N-terminus of CD33 and related Siglecs (sialic acid-binding Ig-like lectins)
    cd20987
    Location:141 → 235
    IgC2_CD33_d2_like; Second immunoglobulin domain of Cluster of Differentiation (CD) 33 and related Siglecs; member of the C2-set of IgSF domains
    cl11960
    Location:240 → 322
    Ig; Immunoglobulin domain

  3. XM_025269853.2 → XP_025125638.1  myelin-associated glycoprotein isoform X2

    Conserved Domains (5) summary
    smart00409
    Location:308 → 384
    IG; Immunoglobulin
    cd00096
    Location:214 → 217
    Ig; Ig strand A [structural motif]
    cd05712
    Location:1 → 113
    IgV_CD33; Immunoglobulin Variable (IgV) domain at the N-terminus of CD33 and related Siglecs (sialic acid-binding Ig-like lectins)
    cd20987
    Location:116 → 210
    IgC2_CD33_d2_like; Second immunoglobulin domain of Cluster of Differentiation (CD) 33 and related Siglecs; member of the C2-set of IgSF domains
    cl11960
    Location:215 → 297
    Ig; Immunoglobulin domain

  4. XM_044932226.1 → XP_044788161.1  myelin-associated glycoprotein isoform X1

    Related
    ENSBALP00030052370.1, ENSBALT00030078184.1
    Conserved Domains (5) summary
    smart00409
    Location:333 → 409
    IG; Immunoglobulin
    cd00096
    Location:239 → 242
    Ig; Ig strand A [structural motif]
    cd05712
    Location:22 → 138
    IgV_CD33; Immunoglobulin Variable (IgV) domain at the N-terminus of CD33 and related Siglecs (sialic acid-binding Ig-like lectins)
    cd20987
    Location:141 → 235
    IgC2_CD33_d2_like; Second immunoglobulin domain of Cluster of Differentiation (CD) 33 and related Siglecs; member of the C2-set of IgSF domains
    cl11960
    Location:240 → 322
    Ig; Immunoglobulin domain

  5. XM_044932227.1 → XP_044788162.1  myelin-associated glycoprotein isoform X2

    Conserved Domains (5) summary
    smart00409
    Location:308 → 384
    IG; Immunoglobulin
    cd00096
    Location:214 → 217
    Ig; Ig strand A [structural motif]
    cd05712
    Location:1 → 113
    IgV_CD33; Immunoglobulin Variable (IgV) domain at the N-terminus of CD33 and related Siglecs (sialic acid-binding Ig-like lectins)
    cd20987
    Location:116 → 210
    IgC2_CD33_d2_like; Second immunoglobulin domain of Cluster of Differentiation (CD) 33 and related Siglecs; member of the C2-set of IgSF domains
    cl11960
    Location:215 → 297
    Ig; Immunoglobulin domain

  6. XM_006068820.3 → XP_006068882.1  myelin-associated glycoprotein isoform X1

    See identical proteins and their annotated locations for XP_006068882.1

    Related
    ENSBALP00030052375.1, ENSBALT00030078195.1
    Conserved Domains (5) summary
    smart00409
    Location:333 → 409
    IG; Immunoglobulin
    cd00096
    Location:239 → 242
    Ig; Ig strand A [structural motif]
    cd05712
    Location:22 → 138
    IgV_CD33; Immunoglobulin Variable (IgV) domain at the N-terminus of CD33 and related Siglecs (sialic acid-binding Ig-like lectins)
    cd20987
    Location:141 → 235
    IgC2_CD33_d2_like; Second immunoglobulin domain of Cluster of Differentiation (CD) 33 and related Siglecs; member of the C2-set of IgSF domains
    cl11960
    Location:240 → 322
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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