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PLD2 phospholipase D2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102392536, updated on 10-Mar-2024

Summary

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Gene symbol
PLD2
Gene description
phospholipase D2
See related
EnsemblRapid:ENSBALG00030007099
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PLD2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (36533678..36546991)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (36475983..36481918)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C17orf114-like Neighboring gene proteasome 20S subunit beta 6 Neighboring gene misshapen like kinase 1 Neighboring gene cholinergic receptor nicotinic epsilon subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    36533678..36546991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045164872.1 → XP_045020807.1  phospholipase D2 isoform X3

  2. XM_045164871.1 → XP_045020806.1  phospholipase D2 isoform X2

    Related
    ENSBALP00030013145.1, ENSBALT00030019772.1

  3. XM_045164870.1 → XP_045020805.1  phospholipase D2 isoform X1

    Related
    ENSBALP00030013160.1, ENSBALT00030019800.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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