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SLC39A5 solute carrier family 39 member 5 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102391181, updated on 10-Mar-2024

Summary

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Gene symbol
SLC39A5
Gene description
solute carrier family 39 member 5
See related
EnsemblRapid:ENSBALG00030005740
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SLC39A5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (63267099..63272494)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (62673423..62678812)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112584546 Neighboring gene uncharacterized LOC102389307 Neighboring gene ring finger protein 41 Neighboring gene nucleic acid binding protein 2 Neighboring gene ankyrin repeat domain 52 Neighboring gene coenzyme Q10A Neighboring gene citrate synthase Neighboring gene canopy FGF signaling regulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular zinc ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc transporter ZIP5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    63267099..63272494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044941507.1 → XP_044797442.1  zinc transporter ZIP5

    Conserved Domains (1) summary
    pfam02535
    Location:247 → 494
    Zip; ZIP Zinc transporter

  2. XM_025283733.2 → XP_025139518.1  zinc transporter ZIP5

    Conserved Domains (1) summary
    pfam02535
    Location:247 → 494
    Zip; ZIP Zinc transporter

  3. XM_006075040.3 → XP_006075102.1  zinc transporter ZIP5

    See identical proteins and their annotated locations for XP_006075102.1

    Related
    ENSBALP00030010718.1, ENSBALT00030016076.1
    Conserved Domains (1) summary
    pfam02535
    Location:247 → 494
    Zip; ZIP Zinc transporter

  4. XM_006075041.3 → XP_006075103.1  zinc transporter ZIP5

    See identical proteins and their annotated locations for XP_006075103.1

    Related
    ENSBALP00030010708.1, ENSBALT00030016061.1
    Conserved Domains (1) summary
    pfam02535
    Location:247 → 494
    Zip; ZIP Zinc transporter

  5. XM_025283732.2 → XP_025139517.1  zinc transporter ZIP5

    Conserved Domains (1) summary
    pfam02535
    Location:247 → 494
    Zip; ZIP Zinc transporter
Nucleotide Protein
Heading Accession and Version

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