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SLC35A1 solute carrier family 35 member A1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102390090, updated on 10-Mar-2024

Summary

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Gene symbol
SLC35A1
Gene description
solute carrier family 35 member A1
See related
EnsemblRapid:ENSBALG00030005424
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SLC35A1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 10 NC_059166.1 (41795192..41826788)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 10 NC_058352.1 (40992545..41024152)

Chromosome 10 - NC_059166.1Genomic Context describing neighboring genes Neighboring gene chromosome 10 C6orf163 homolog Neighboring gene cilia and flagella associated protein 206 Neighboring gene arginyl-tRNA synthetase 2, mitochondrial Neighboring gene origin recognition complex subunit 3 Neighboring gene akirin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-sialic acid transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059166.1 Reference NDDB_SH_1 Primary Assembly

    Range
    41795192..41826788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044924272.2 → XP_044780207.1  CMP-sialic acid transporter isoform X2

    Related
    ENSBALP00030010085.1, ENSBALT00030015175.1
    Conserved Domains (1) summary
    TIGR00803
    Location:58 → 281
    nst; UDP-galactose transporter

  2. XM_006058070.4 → XP_006058132.3  CMP-sialic acid transporter isoform X1

    Related
    ENSBALP00030010097.1, ENSBALT00030015203.1
    Conserved Domains (1) summary
    TIGR00803
    Location:90 → 313
    nst; UDP-galactose transporter
Nucleotide Protein
Heading Accession and Version

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