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ACSL5 acyl-CoA synthetase long chain family member 5 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102389907, updated on 10-Mar-2024

Summary

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Gene symbol
ACSL5
Gene description
acyl-CoA synthetase long chain family member 5
See related
EnsemblRapid:ENSBALG00030012592
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See ACSL5 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
25
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 23 NC_059179.1 (32904829..32955928)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 23 NC_058365.1 (32450864..32501947)

Chromosome 23 - NC_059179.1Genomic Context describing neighboring genes Neighboring gene zona pellucida sperm-binding protein 4-like Neighboring gene uncharacterized LOC123331349 Neighboring gene tectorin beta Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene zinc finger DHHC-type palmitoyltransferase 6 Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene uncharacterized LOC123331433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059179.1 Reference NDDB_SH_1 Primary Assembly

    Range
    32904829..32955928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006043947.4 → XP_006044009.3  long-chain-fatty-acid--CoA ligase 5 isoform X2

    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_006043946.4 → XP_006044008.3  long-chain-fatty-acid--CoA ligase 5 isoform X1

    Related
    ENSBALP00030023765.1, ENSBALT00030035214.1
    Conserved Domains (1) summary
    cd05927
    Location:137 → 714
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  3. XM_006043948.4 → XP_006044010.3  long-chain-fatty-acid--CoA ligase 5 isoform X3

    Related
    ENSBALP00030023756.1, ENSBALT00030035197.1
    Conserved Domains (1) summary
    cd05927
    Location:55 → 632
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_044935240.2 → XP_044791175.2  long-chain-fatty-acid--CoA ligase 5 isoform X2

    Related
    ENSBALP00030023730.1, ENSBALT00030035160.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  5. XM_045164123.1 → XP_045020058.1  long-chain-fatty-acid--CoA ligase 5 isoform X2

    Related
    ENSBALP00030023792.1, ENSBALT00030035254.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
Heading Accession and Version

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