U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DPY19L1 dpy-19 like C-mannosyltransferase 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102389718, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DPY19L1
Gene description
dpy-19 like C-mannosyltransferase 1
See related
EnsemblRapid:ENSBALG00030033488
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DPY19L1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
22
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 8 NC_059164.1 (61627072..61704864)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 8 NC_058350.1 (60846094..60938987)

Chromosome 8 - NC_059164.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein DKFZp434B061-like Neighboring gene dpy-19 like 2 Neighboring gene uncharacterized LOC112586495 Neighboring gene U6 spliceosomal RNA Neighboring gene neuropeptide S receptor 1 Neighboring gene uncharacterized LOC102390371

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable C-mannosyltransferase DPY19L1
Names
dpy-19 like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059164.1 Reference NDDB_SH_1 Primary Assembly

    Range
    61627072..61704864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045166415.1 → XP_045022350.1  probable C-mannosyltransferase DPY19L1

    Related
    ENSBALP00030062115.1, ENSBALT00030092833.1
    Conserved Domains (2) summary
    pfam10034
    Location:107 → 745
    Dpy19; Q-cell neuroblast polarisation
    pfam15710
    Location:9 → 54
    DUF4671; Domain of unknown function (DUF4671)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.