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TECTB tectorin beta [ Bubalus bubalis (water buffalo) ]

Gene ID: 102389572, updated on 10-Mar-2024

Summary

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Gene symbol
TECTB
Gene description
tectorin beta
See related
EnsemblRapid:ENSBALG00030012553
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See TECTB in Genome Data Viewer
Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 23 NC_059179.1 (32812518..32832757)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 23 NC_058365.1 (32358846..32378892)

Chromosome 23 - NC_059179.1Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate acyltransferase, mitochondrial Neighboring gene zona pellucida sperm-binding protein 4-like Neighboring gene uncharacterized LOC123331349 Neighboring gene acyl-CoA synthetase long chain family member 5 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene zinc finger DHHC-type palmitoyltransferase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-tectorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059179.1 Reference NDDB_SH_1 Primary Assembly

    Range
    32812518..32832757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044935066.2 → XP_044791001.1  beta-tectorin isoform X1

    Conserved Domains (1) summary
    cl27758
    Location:32 → 283
    Zona_pellucida; Zona pellucida-like domain

  2. XM_044935068.2 → XP_044791003.1  beta-tectorin isoform X3

    Conserved Domains (1) summary
    cl27758
    Location:32 → 283
    Zona_pellucida; Zona pellucida-like domain

  3. XM_044935069.2 → XP_044791004.1  beta-tectorin isoform X4

    Related
    ENSBALP00030023642.1, ENSBALT00030035020.1
    Conserved Domains (1) summary
    cl27758
    Location:32 → 293
    Zona_pellucida; Zona pellucida-like domain

  4. XM_044935070.2 → XP_044791005.1  beta-tectorin isoform X6

    Related
    ENSBALP00030023648.1, ENSBALT00030035033.1
    Conserved Domains (1) summary
    cl27758
    Location:32 → 293
    Zona_pellucida; Zona pellucida-like domain

  5. XM_044935071.2 → XP_044791006.1  beta-tectorin isoform X7

    Conserved Domains (1) summary
    cl27758
    Location:32 → 283
    Zona_pellucida; Zona pellucida-like domain

  6. XM_044935067.2 → XP_044791002.1  beta-tectorin isoform X2

    Related
    ENSBALP00030023666.1, ENSBALT00030035060.1
    Conserved Domains (1) summary
    cl27758
    Location:32 → 273
    Zona_pellucida; Zona pellucida-like domain

  7. XM_006043945.4 → XP_006044007.1  beta-tectorin isoform X5

    Related
    ENSBALP00030023671.1, ENSBALT00030035069.1
    Conserved Domains (2) summary
    smart00241
    Location:32 → 283
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:140 → 280
    Zona_pellucida; Zona pellucida-like domain
Nucleotide Protein
Heading Accession and Version

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