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COG5 component of oligomeric golgi complex 5 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102389049, updated on 10-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
See related
EnsemblRapid:ENSBALG00030040322
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 8 NC_059164.1 (47888619..48174012, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 8 NC_058350.1 (47442873..47727414, complement)

Chromosome 8 - NC_059164.1Genomic Context describing neighboring genes Neighboring gene 39S ribosomal protein L22, mitochondrial-like Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene HMG-box transcription factor 1 Neighboring gene G protein-coupled receptor 22 Neighboring gene proline-rich protein 2-like Neighboring gene dihydrouridine synthase 4 like Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059164.1 Reference NDDB_SH_1 Primary Assembly

    Range
    47888619..48174012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044946598.2 → XP_044802533.2  conserved oligomeric Golgi complex subunit 5

    Related
    ENSBALP00030074170.1, ENSBALT00030111475.1

RNA

  1. XR_006552749.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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