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ALDOB aldolase, fructose-bisphosphate B [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102388808, updated on 10-Mar-2024

Summary

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Gene symbol
ALDOB
Gene description
aldolase, fructose-bisphosphate B
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ALDOB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841837.1 (6719161..6745996)

NW_005841837.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 20 Neighboring gene post-GPI attachment to proteins GalNAc transferase 4 Neighboring gene bile acid-CoA:amino acid N-acyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841837 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fructose-1-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fructose-bisphosphate aldolase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841837.1 Reference ASM45574v1 Primary Assembly

    Range
    6719161..6745996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025202927.1 → XP_025058712.1  fructose-bisphosphate aldolase B isoform X1

    UniProtKB/TrEMBL
    A0A3Q0GGV3
    Conserved Domains (1) summary
    pfam00274
    Location:16 → 334
    Glycolytic; Fructose-bisphosphate aldolase class-I

  2. XM_025202930.1 → XP_025058715.1  fructose-bisphosphate aldolase B isoform X1

    UniProtKB/TrEMBL
    A0A3Q0GGV3
    Conserved Domains (1) summary
    pfam00274
    Location:16 → 334
    Glycolytic; Fructose-bisphosphate aldolase class-I

  3. XM_014519653.2 → XP_014375139.1  fructose-bisphosphate aldolase B isoform X2

    UniProtKB/TrEMBL
    A0A1U8DBN5
    Conserved Domains (1) summary
    pfam00274
    Location:16 → 364
    Glycolytic; Fructose-bisphosphate aldolase class-I
Nucleotide Protein
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