U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAN1A2 mannosidase alpha class 1A member 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102388362, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MAN1A2
Gene description
mannosidase alpha class 1A member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MAN1A2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842323.1 (47211..264983)

NW_005842323.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene CD86 molecule Neighboring gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 Neighboring gene hydroxyacid oxidase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005842323 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IB

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842323.1 Reference ASM45574v1 Primary Assembly

    Range
    47211..264983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006028550.3 → XP_006028612.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X1

    UniProtKB/TrEMBL
    A0A1U7RSR3
    Conserved Domains (3) summary
    pfam01532
    Location:219 → 658
    Glyco_hydro_47; Glycosyl hydrolase family 47
    pfam05672
    Location:130 → 182
    MAP7; MAP7 (E-MAP-115) family
    cl21478
    Location:133 → 183
    ATP-synt_B; ATP synthase B/B' CF(0)

  2. XM_006028551.3 → XP_006028613.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X2

    UniProtKB/TrEMBL
    A0A1U7RZK9
    Conserved Domains (2) summary
    pfam01532
    Location:189 → 628
    Glyco_hydro_47; Glycosyl hydrolase family 47
    cl21478
    Location:109 → 153
    ATP-synt_B; ATP synthase B/B' CF(0)

  3. XM_025209999.1 → XP_025065784.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X3

    UniProtKB/TrEMBL
    A0A3Q0H193
    Conserved Domains (2) summary
    pfam01532
    Location:219 → 533
    Glyco_hydro_47; Glycosyl hydrolase family 47
    cl25742
    Location:130 → 182
    ERM; Ezrin/radixin/moesin family

  4. XM_014522227.2 → XP_014377713.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X4

    UniProtKB/TrEMBL
    A0A1U8D8U3
    Conserved Domains (3) summary
    pfam01532
    Location:219 → 533
    Glyco_hydro_47; Glycosyl hydrolase family 47
    pfam05672
    Location:130 → 182
    MAP7; MAP7 (E-MAP-115) family
    cl21478
    Location:133 → 183
    ATP-synt_B; ATP synthase B/B' CF(0)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.