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ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102388354, updated on 10-Mar-2024

Summary

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Gene symbol
ENPP2
Gene description
ectonucleotide pyrophosphatase/phosphodiesterase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ENPP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842210.1 (547882..668672)

NW_005842210.1Genomic Context describing neighboring genes Neighboring gene DNA replication and sister chromatid cohesion 1 Neighboring gene TATA-box binding protein associated factor 2 Neighboring gene cellular communication network factor 3 Neighboring gene mal, T cell differentiation protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842210 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alkylglycerophosphoethanolamine phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphodiesterase I activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polysaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylcholine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ectonucleotide pyrophosphatase/phosphodiesterase family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842210.1 Reference ASM45574v1 Primary Assembly

    Range
    547882..668672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006026805.3 → XP_006026867.1  ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1U7RP76
    Conserved Domains (5) summary
    smart00201
    Location:95 → 138
    SO; Somatomedin B -like domains
    smart00477
    Location:658 → 888
    NUC; DNA/RNA non-specific endonuclease
    pfam01033
    Location:53 → 92
    Somatomedin_B; Somatomedin B domain
    pfam01663
    Location:162 → 526
    Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
    cd16018
    Location:160 → 566
    Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin

  2. XM_006026804.3 → XP_006026866.1  ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7RZZ5
    Conserved Domains (5) summary
    smart00201
    Location:96 → 139
    SO; Somatomedin B -like domains
    smart00477
    Location:659 → 889
    NUC; DNA/RNA non-specific endonuclease
    pfam01033
    Location:54 → 93
    Somatomedin_B; Somatomedin B domain
    pfam01663
    Location:163 → 527
    Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
    cd16018
    Location:161 → 567
    Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin

  3. XM_006026802.3 → XP_006026864.1  ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U7S9Z0
    Conserved Domains (5) summary
    smart00201
    Location:99 → 142
    SO; Somatomedin B -like domains
    smart00477
    Location:662 → 892
    NUC; DNA/RNA non-specific endonuclease
    pfam01033
    Location:57 → 96
    Somatomedin_B; Somatomedin B domain
    pfam01663
    Location:166 → 530
    Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
    cd16018
    Location:164 → 570
    Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin

  4. XM_006026806.3 → XP_006026868.1  ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X4

    UniProtKB/TrEMBL
    A0A1U7RVZ6
    Conserved Domains (5) summary
    smart00201
    Location:99 → 142
    SO; Somatomedin B -like domains
    smart00477
    Location:610 → 840
    NUC; DNA/RNA non-specific endonuclease
    pfam01033
    Location:57 → 96
    Somatomedin_B; Somatomedin B domain
    pfam01663
    Location:166 → 478
    Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
    cd16018
    Location:164 → 518
    Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
Nucleotide Protein
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