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GLCE glucuronic acid epimerase [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102386367, updated on 10-Mar-2024

Summary

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Gene symbol
GLCE
Gene description
glucuronic acid epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See GLCE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842572.1 (35682..133777)

NW_005842572.1Genomic Context describing neighboring genes Neighboring gene progestin and adipoQ receptor family member 5 Neighboring gene kinesin family member 23 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842572 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparosan-N-sulfate-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D-glucuronyl C5-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842572.1 Reference ASM45574v1 Primary Assembly

    Range
    35682..133777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025214189.1 → XP_025069974.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  2. XM_025214187.1 → XP_025069972.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  3. XM_025214188.1 → XP_025069973.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  4. XM_025214191.1 → XP_025069976.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  5. XM_025214190.1 → XP_025069975.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  6. XM_025214192.1 → XP_025069977.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  7. XM_025214193.1 → XP_025069978.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  8. XM_006032441.3 → XP_006032503.1  D-glucuronyl C5-epimerase isoform X2

    See identical proteins and their annotated locations for XP_006032503.1

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  9. XM_025214195.1 → XP_025069980.1  D-glucuronyl C5-epimerase isoform X3

    UniProtKB/TrEMBL
    A0A3Q0HHI0

  10. XM_014524086.2 → XP_014379572.1  D-glucuronyl C5-epimerase isoform X1

    UniProtKB/TrEMBL
    A0A1U8DEB6
    Conserved Domains (1) summary
    pfam06662
    Location:426 → 606
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus

  11. XM_025214194.1 → XP_025069979.1  D-glucuronyl C5-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A1U7SB72
    Conserved Domains (1) summary
    pfam06662
    Location:416 → 596
    C5-epim_C; D-glucuronyl C5-epimerase C-terminus
Nucleotide Protein
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