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COG7 component of oligomeric golgi complex 7 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102386020, updated on 10-Mar-2024

Summary

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Gene symbol
COG7
Gene description
component of oligomeric golgi complex 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See COG7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842225.1 (1342055..1366908)

NW_005842225.1Genomic Context describing neighboring genes Neighboring gene glutamyl-tRNA synthetase 2, mitochondrial Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 2 Neighboring gene uncharacterized LOC112550854 Neighboring gene sodium channel epithelial 1 subunit beta Neighboring gene sodium channel epithelial 1 subunit gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842225 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842225.1 Reference ASM45574v1 Primary Assembly

    Range
    1342055..1366908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006027134.3 → XP_006027196.1  conserved oligomeric Golgi complex subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A1U7S0M3
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 766
    COG7; Golgi complex component 7 (COG7)

  2. XM_025208217.1 → XP_025064002.1  conserved oligomeric Golgi complex subunit 7 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0GX33
    Conserved Domains (1) summary
    pfam10191
    Location:1 → 702
    COG7; Golgi complex component 7 (COG7)
Nucleotide Protein
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