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KIRREL2 kirre like nephrin family adhesion molecule 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102383405, updated on 10-Mar-2024

Summary

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Gene symbol
KIRREL2
Gene description
kirre like nephrin family adhesion molecule 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See KIRREL2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842918.1 (137913..150390, complement)

NW_005842918.1Genomic Context describing neighboring genes Neighboring gene proline and serine rich 3 Neighboring gene Rho GTPase activating protein 33 Neighboring gene amyloid beta precursor like protein 1 Neighboring gene IgGFc-binding protein-like Neighboring gene IgGFc-binding protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842918 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 2
Names
kin of IRRE like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842918.1 Reference ASM45574v1 Primary Assembly

    Range
    137913..150390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025192376.1 → XP_025048161.1  kin of IRRE-like protein 2

    UniProtKB/TrEMBL
    A0A3Q0FKK1
    Conserved Domains (3) summary
    smart00410
    Location:22 → 111
    IG_like; Immunoglobulin like
    pfam13895
    Location:210 → 278
    Ig_2; Immunoglobulin domain
    cl11960
    Location:294 → 391
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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