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LPCAT4 lysophosphatidylcholine acyltransferase 4 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102382492, updated on 10-Mar-2024

Summary

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Gene symbol
LPCAT4
Gene description
lysophosphatidylcholine acyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See LPCAT4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842295.1 (45052..77462, complement)

NW_005842295.1Genomic Context describing neighboring genes Neighboring gene NOP10 ribonucleoprotein Neighboring gene NUT midline carcinoma family member 1 Neighboring gene olfactory receptor 4N2-like Neighboring gene uncharacterized LOC112551020

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842295 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerophosphocholine O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophospholipid acyltransferase LPCAT4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842295.1 Reference ASM45574v1 Primary Assembly

    Range
    45052..77462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025209566.1 → XP_025065351.1  lysophospholipid acyltransferase LPCAT4 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0H4M6
    Conserved Domains (1) summary
    cd07991
    Location:1 → 207
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

  2. XM_025209565.1 → XP_025065350.1  lysophospholipid acyltransferase LPCAT4 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0H4M6
    Conserved Domains (1) summary
    cd07991
    Location:1 → 207
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

  3. XM_025209567.1 → XP_025065352.1  lysophospholipid acyltransferase LPCAT4 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0H0T9
    Conserved Domains (1) summary
    cd07991
    Location:61 → 269
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

  4. XM_025209564.1 → XP_025065349.1  lysophospholipid acyltransferase LPCAT4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0H018
    Conserved Domains (1) summary
    cd07991
    Location:61 → 269
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
Nucleotide Protein
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