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AKR1A1 aldo-keto reductase family 1 member A1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102381941, updated on 11-Apr-2024

Summary

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Gene symbol
AKR1A1
Gene description
aldo-keto reductase family 1 member A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See AKR1A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841845.1 (3576009..3606780, complement)

NW_005841845.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 17 Neighboring gene nuclear autoantigenic sperm protein Neighboring gene peroxiredoxin 1 Neighboring gene metabolism of cobalamin associated C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841845 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aldehyde catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alcohol dehydrogenase [NADP(+)]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841845.1 Reference ASM45574v1 Primary Assembly

    Range
    3576009..3606780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006015774.3 → XP_006015836.2  alcohol dehydrogenase [NADP(+)] isoform X2

    UniProtKB/TrEMBL
    A0A1U7RMW2

  2. XM_025206623.1 → XP_025062408.1  alcohol dehydrogenase [NADP(+)] isoform X3

    UniProtKB/TrEMBL
    A0A3Q0GW58

  3. XM_025206627.1 → XP_025062412.1  alcohol dehydrogenase [NADP(+)] isoform X4

    UniProtKB/TrEMBL
    A0A3Q0GSL5
    Conserved Domains (1) summary
    COG0656
    Location:5 → 305
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]

  4. XM_025206612.1 → XP_025062397.1  alcohol dehydrogenase [NADP(+)] isoform X1

    UniProtKB/TrEMBL
    A0A3Q0GSK0
Nucleotide Protein
Heading Accession and Version

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