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FAR1 fatty acyl-CoA reductase 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102381656, updated on 10-Mar-2024

Summary

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Gene symbol
FAR1
Gene description
fatty acyl-CoA reductase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See FAR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842278.1 (38232..74242)

NW_005842278.1Genomic Context describing neighboring genes Neighboring gene ovochymase 2 Neighboring gene NADH-cytochrome b5 reductase 2 Neighboring gene PPFIA binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842278 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acyl-CoA reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842278.1 Reference ASM45574v1 Primary Assembly

    Range
    38232..74242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006027943.3 → XP_006028005.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1U7S9P4
    Conserved Domains (3) summary
    cd05236
    Location:11 → 333
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:2 → 449
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:360 → 450
    Sterile; Male sterility protein

  2. XM_025209273.1 → XP_025065058.1  fatty acyl-CoA reductase 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0H3W1
    Conserved Domains (2) summary
    cd05236
    Location:11 → 333
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:360 → 450
    Sterile; Male sterility protein

  3. XM_006027944.3 → XP_006028006.1  fatty acyl-CoA reductase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1U7SCB9
    Conserved Domains (3) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:2 → 446
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  4. XM_025209274.1 → XP_025065059.1  fatty acyl-CoA reductase 1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0GZ75
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein
Nucleotide Protein
Heading Accession and Version

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