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ACOX2 acyl-CoA oxidase 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102380977, updated on 10-Mar-2024

Summary

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Gene symbol
ACOX2
Gene description
acyl-CoA oxidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ACOX2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841934.1 (3461561..3481580)

NW_005841934.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112549583 Neighboring gene protein FAM3D-like Neighboring gene family with sequence similarity 107 member A Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene pyruvate dehydrogenase E1 subunit beta Neighboring gene PX domain containing serine/threonine kinase like Neighboring gene ribonuclease P/MRP subunit p14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841934 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841934.1 Reference ASM45574v1 Primary Assembly

    Range
    3461561..3481580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014517982.2 → XP_014373468.1  peroxisomal acyl-coenzyme A oxidase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CWR3
    Conserved Domains (1) summary
    cl09933
    Location:17 → 646
    ACAD; Acyl-CoA dehydrogenase

  2. XM_006019628.3 → XP_006019690.1  peroxisomal acyl-coenzyme A oxidase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CWR3
    Conserved Domains (1) summary
    cl09933
    Location:17 → 646
    ACAD; Acyl-CoA dehydrogenase

  3. XM_025199008.1 → XP_025054793.1  peroxisomal acyl-coenzyme A oxidase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CWR3
    Conserved Domains (1) summary
    cl09933
    Location:17 → 646
    ACAD; Acyl-CoA dehydrogenase

  4. XM_025199011.1 → XP_025054796.1  peroxisomal acyl-coenzyme A oxidase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0G534

  5. XM_025199010.1 → XP_025054795.1  peroxisomal acyl-coenzyme A oxidase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0G534
Nucleotide Protein
Heading Accession and Version

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