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B3GALT5 beta-1,3-galactosyltransferase 5 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102380495, updated on 10-Mar-2024

Summary

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Gene symbol
B3GALT5
Gene description
beta-1,3-galactosyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See B3GALT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842113.1 (1310032..1351182, complement)

NW_005842113.1Genomic Context describing neighboring genes Neighboring gene Purkinje cell protein 4 Neighboring gene immunoglobulin superfamily member 5 Neighboring gene uncharacterized LOC112550451 Neighboring gene SH3 domain-binding glutamic acid-rich-like protein Neighboring gene uncharacterized LOC112550450 Neighboring gene lebercilin LCA5 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842113 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842113.1 Reference ASM45574v1 Primary Assembly

    Range
    1310032..1351182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025205371.1 → XP_025061156.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  2. XM_025205368.1 → XP_025061153.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  3. XM_025205372.1 → XP_025061157.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  4. XM_025205366.1 → XP_025061151.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  5. XM_025205369.1 → XP_025061154.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  6. XM_014520394.2 → XP_014375880.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  7. XM_014520393.2 → XP_014375879.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  8. XM_025205367.1 → XP_025061152.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

  9. XM_025205365.1 → XP_025061150.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A1U8DF88
    Conserved Domains (1) summary
    cl21608
    Location:87 → 276
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_003094302.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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