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CALR3 calreticulin 3 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102380341, updated on 10-Mar-2024

Summary

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Gene symbol
CALR3
Gene description
calreticulin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See CALR3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842344.1 (1325555..1335423)

NW_005842344.1Genomic Context describing neighboring genes Neighboring gene calcium homeostasis endoplasmic reticulum protein Neighboring gene chromosome unknown C19orf44 homolog Neighboring gene epidermal growth factor receptor pathway substrate 15 like 1 Neighboring gene KLF transcription factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842344 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calreticulin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842344.1 Reference ASM45574v1 Primary Assembly

    Range
    1325555..1335423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025210332.1 → XP_025066117.1  calreticulin-3

    UniProtKB/TrEMBL
    A0A3Q0H337
    Conserved Domains (1) summary
    pfam00262
    Location:68 → 368
    Calreticulin; Calreticulin family
Nucleotide Protein
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