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HYAL1 hyaluronidase 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102378863, updated on 10-Mar-2024

Summary

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Gene symbol
HYAL1
Gene description
hyaluronidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See HYAL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842079.1 (846139..852057, complement)

NW_005842079.1Genomic Context describing neighboring genes Neighboring gene leucine rich single-pass membrane protein 2 Neighboring gene hyaluronidase 3 Neighboring gene N-alpha-acetyltransferase 80, NatH catalytic subunit Neighboring gene hyaluronidase 2 Neighboring gene tumor suppressor 2, mitochondrial calcium regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842079 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase-1
Names
hyaluronoglucosaminidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842079.1 Reference ASM45574v1 Primary Assembly

    Range
    846139..852057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006023750.3 → XP_006023812.1  hyaluronidase-1 isoform X1

    UniProtKB/TrEMBL
    A0A1U7RPT1
    Conserved Domains (1) summary
    pfam01630
    Location:34 → 360
    Glyco_hydro_56; Hyaluronidase

  2. XM_025204335.1 → XP_025060120.1  hyaluronidase-1 isoform X1

    UniProtKB/TrEMBL
    A0A1U7RPT1
    Conserved Domains (1) summary
    pfam01630
    Location:34 → 360
    Glyco_hydro_56; Hyaluronidase

  3. XM_025204337.1 → XP_025060122.1  hyaluronidase-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0GL24

  4. XM_025204338.1 → XP_025060123.1  hyaluronidase-1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0GPK0
Nucleotide Protein
Heading Accession and Version

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