U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DPY19L3 dpy-19 like C-mannosyltransferase 3 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102378420, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DPY19L3
Gene description
dpy-19 like C-mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DPY19L3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841863.1 (3450911..3518406)

NW_005841863.1Genomic Context describing neighboring genes Neighboring gene teashirt zinc finger homeobox 3 Neighboring gene zinc finger protein 507 Neighboring gene neural-cadherin-like Neighboring gene programmed cell death 5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005841863 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable C-mannosyltransferase DPY19L3
Names
dpy-19 like 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841863.1 Reference ASM45574v1 Primary Assembly

    Range
    3450911..3518406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006016603.3 → XP_006016665.1  probable C-mannosyltransferase DPY19L3 isoform X1

    See identical proteins and their annotated locations for XP_006016665.1

    UniProtKB/TrEMBL
    A0A1U7R3F0
    Conserved Domains (1) summary
    pfam10034
    Location:60 → 714
    Dpy19; Q-cell neuroblast polarization

  2. XM_006016604.2 → XP_006016666.1  probable C-mannosyltransferase DPY19L3 isoform X1

    See identical proteins and their annotated locations for XP_006016666.1

    UniProtKB/TrEMBL
    A0A1U7R3F0
    Conserved Domains (1) summary
    pfam10034
    Location:60 → 714
    Dpy19; Q-cell neuroblast polarization

  3. XM_025216683.1 → XP_025072468.1  probable C-mannosyltransferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0HPN2
    Conserved Domains (1) summary
    pfam10034
    Location:1 → 580
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.