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EFNA2 ephrin A2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102378024, updated on 10-Mar-2024

Summary

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Gene symbol
EFNA2
Gene description
ephrin A2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See EFNA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841880.1 (880428..977959, complement)

NW_005841880.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent protein kinase type IV-like Neighboring gene PWWP domain containing 3A, DNA repair factor Neighboring gene family with sequence similarity 174 member C Neighboring gene cold inducible RNA binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841880 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin-A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841880.1 Reference ASM45574v1 Primary Assembly

    Range
    880428..977959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025196545.1 → XP_025052330.1  ephrin-A2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G1T4
    Conserved Domains (1) summary
    cd10425
    Location:29 → 158
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A

  2. XM_006017439.3 → XP_006017501.1  ephrin-A2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7RCI1
    Conserved Domains (1) summary
    cd10425
    Location:29 → 158
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
Nucleotide Protein
Heading Accession and Version

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