U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPT2 palmitoyl-protein thioesterase 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102377936, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PPT2
Gene description
palmitoyl-protein thioesterase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PPT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842983.1 (204393..208586, complement)

NW_005842983.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 12 Neighboring gene euchromatic histone lysine methyltransferase 2 Neighboring gene solute carrier family 44 member 4 Neighboring gene carnitine O-acetyltransferase-like Neighboring gene carnitine O-acetyltransferase-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005842983 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: lysosomal thioesterase PPT2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842983.1 Reference ASM45574v1 Primary Assembly

    Range
    204393..208586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025192945.1 → XP_025048730.1  LOW QUALITY PROTEIN: lysosomal thioesterase PPT2

    UniProtKB/TrEMBL
    A0A3Q0FRG0
    Conserved Domains (1) summary
    cl21494
    Location:31 → 285
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.