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HIBCH 3-hydroxyisobutyryl-CoA hydrolase [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102376984, updated on 10-Mar-2024

Summary

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Gene symbol
HIBCH
Gene description
3-hydroxyisobutyryl-CoA hydrolase
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See HIBCH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842790.1 (507776..626004)

NW_005842790.1Genomic Context describing neighboring genes Neighboring gene nuclear envelope integral membrane protein 2 Neighboring gene major facilitator superfamily domain containing 6 Neighboring gene myostatin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842790 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyisobutyryl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842790.1 Reference ASM45574v1 Primary Assembly

    Range
    507776..626004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006034995.3 → XP_006035057.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A1U7SR31
    Conserved Domains (2) summary
    PRK05617
    Location:35 → 348
    PRK05617; 3-hydroxyisobutyryl-CoA hydrolase; Provisional
    pfam16113
    Location:46 → 345
    ECH_2; Enoyl-CoA hydratase/isomerase

  2. XM_006034994.3 → XP_006035056.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A1U7SNK8
    Conserved Domains (2) summary
    PRK05617
    Location:35 → 377
    PRK05617; 3-hydroxyisobutyryl-CoA hydrolase; Provisional
    pfam16113
    Location:46 → 374
    ECH_2; Enoyl-CoA hydratase/isomerase

  3. XM_025191138.1 → XP_025046923.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q0FMN9
    Conserved Domains (1) summary
    pfam16113
    Location:20 → 348
    ECH_2; Enoyl-CoA hydratase/isomerase

  4. XM_025191139.1 → XP_025046924.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q0FMN9
    Conserved Domains (1) summary
    pfam16113
    Location:20 → 348
    ECH_2; Enoyl-CoA hydratase/isomerase

RNA

  1. XR_003091679.1 RNA Sequence

  2. XR_325097.2 RNA Sequence

  3. XR_325096.2 RNA Sequence

  4. XR_003091676.1 RNA Sequence

  5. XR_003091677.1 RNA Sequence

  6. XR_003091678.1 RNA Sequence

Nucleotide Protein
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