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LOC102376263 alpha-(1,3)-fucosyltransferase 6-like [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102376263, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102376263
Gene description
alpha-(1,3)-fucosyltransferase 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
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Genomic context

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See LOC102376263 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841880.1 (4136895..4138793)

NW_005841880.1Genomic Context describing neighboring genes Neighboring gene protein-lysine 6-oxidase-like Neighboring gene nicotinamide riboside kinase 2 Neighboring gene ATCAY kinesin light chain interacting caytaxin Neighboring gene galactoside 3(4)-L-fucosyltransferase-like Neighboring gene neurturin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841880 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841880.1 Reference ASM45574v1 Primary Assembly

    Range
    4136895..4138793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006017600.2 → XP_006017662.1  alpha-(1,3)-fucosyltransferase 6-like

    UniProtKB/TrEMBL
    A0A1U7RGK0
    Conserved Domains (2) summary
    pfam00852
    Location:192 → 361
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:68 → 176
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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