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CLEC3A C-type lectin domain family 3 member A [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102373444, updated on 10-Mar-2024

Summary

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Gene symbol
CLEC3A
Gene description
C-type lectin domain family 3 member A
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See CLEC3A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841856.1 (5009429..5017087)

NW_005841856.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 7 Neighboring gene vesicle amine transport 1 like Neighboring gene transfer RNA leucine (anticodon UAG) Neighboring gene WW domain containing oxidoreductase Neighboring gene uncharacterized LOC112551735

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841856 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 3 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841856.1 Reference ASM45574v1 Primary Assembly

    Range
    5009429..5017087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006016429.1 → XP_006016491.1  C-type lectin domain family 3 member A

    UniProtKB/TrEMBL
    A0A1U7REC5
    Conserved Domains (1) summary
    cd03596
    Location:67 → 192
    CLECT_tetranectin_like; C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF)
Nucleotide Protein
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