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FH fumarate hydratase [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102373049, updated on 11-Apr-2024

Summary

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Gene symbol
FH
Gene description
fumarate hydratase
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841919.1 (3324286..3353328)

NW_005841919.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 127 Neighboring gene succinate dehydrogenase complex flavoprotein subunit A Neighboring gene charged multivesicular body protein 5 Neighboring gene BAG cochaperone 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841919 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fumarate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fumarate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of tricarboxylic acid cycle heteromeric enzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fumarate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841919.1 Reference ASM45574v1 Primary Assembly

    Range
    3324286..3353328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006019000.3 → XP_006019062.1  fumarate hydratase, mitochondrial

    UniProtKB/TrEMBL
    A0A1U7R8B4
    Conserved Domains (3) summary
    cd01362
    Location:164 → 619
    Fumarase_classII; Class II fumarases
    PRK00485
    Location:162 → 623
    fumC; fumarate hydratase; Reviewed
    cl14782
    Location:90 → 151
    RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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