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PIGH phosphatidylinositol glycan anchor biosynthesis class H [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102372876, updated on 10-Mar-2024

Summary

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Gene symbol
PIGH
Gene description
phosphatidylinositol glycan anchor biosynthesis class H
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PIGH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841991.1 (765573..940113, complement)

NW_005841991.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene RAD51 paralog B Neighboring gene uncharacterized LOC102372464 Neighboring gene transmembrane protein 229B Neighboring gene U5 spliceosomal RNA Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H1 Neighboring gene vesicle transport through interaction with t-SNAREs 1B Neighboring gene arginase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841991 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841991.1 Reference ASM45574v1 Primary Assembly

    Range
    765573..940113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025201347.1 → XP_025057132.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform X3

    UniProtKB/TrEMBL
    A0A3Q0GCE7
    Conserved Domains (1) summary
    pfam10181
    Location:82 → 151
    PIG-H; GPI-GlcNAc transferase complex, PIG-H component

  2. XM_006021396.2 → XP_006021458.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform X2

    UniProtKB/TrEMBL
    A0A1U7RCW5
    Conserved Domains (1) summary
    pfam10181
    Location:83 → 151
    PIG-H; GPI-GlcNAc transferase complex, PIG-H component

  3. XM_006021395.3 → XP_006021457.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform X1

    UniProtKB/TrEMBL
    A0A1U7RNU9
    Conserved Domains (1) summary
    pfam10181
    Location:83 → 151
    PIG-H; GPI-GlcNAc transferase complex, PIG-H component

  4. XM_025201348.1 → XP_025057133.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform X4

    UniProtKB/TrEMBL
    A0A3Q0GG42
    Conserved Domains (1) summary
    pfam10181
    Location:82 → 151
    PIG-H; GPI-GlcNAc transferase complex, PIG-H component

  5. XM_025201350.1 → XP_025057135.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform X5

    UniProtKB/TrEMBL
    A0A3Q0GFC6
    Conserved Domains (1) summary
    pfam10181
    Location:82 → 127
    PIG-H; GPI-GlcNAc transferase complex, PIG-H component

RNA

  1. XR_003093519.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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