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SLC35B4 solute carrier family 35 member B4 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102372577, updated on 10-Mar-2024

Summary

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Gene symbol
SLC35B4
Gene description
solute carrier family 35 member B4
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See SLC35B4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842458.1 (172628..191290)

NW_005842458.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene adenylate cyclase-like Neighboring gene transfer RNA proline (anticodon CGG) Neighboring gene leucine rich repeats and guanylate kinase domain containing Neighboring gene exocyst complex component 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842458 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-xylose and UDP-N-acetylglucosamine transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842458.1 Reference ASM45574v1 Primary Assembly

    Range
    172628..191290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014523190.1 → XP_014378676.1  UDP-xylose and UDP-N-acetylglucosamine transporter

    UniProtKB/TrEMBL
    A0A1U8DEC7
    Conserved Domains (2) summary
    pfam08449
    Location:71 → 357
    UAA; UAA transporter family
    cl23754
    Location:130 → 353
    EamA; EamA-like transporter family
Nucleotide Protein
Heading Accession and Version

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