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CTNS cystinosin, lysosomal cystine transporter [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102372418, updated on 10-Mar-2024

Summary

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Gene symbol
CTNS
Gene description
cystinosin, lysosomal cystine transporter
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See CTNS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842608.1 (707862..714837)

NW_005842608.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily V member 1 Neighboring gene uncharacterized LOC112551797 Neighboring gene sedoheptulokinase Neighboring gene purinergic receptor P2X 5 Neighboring gene integrin subunit alpha E Neighboring gene transient receptor potential cation channel subfamily V member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842608 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-cystine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cystine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystinosin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842608.1 Reference ASM45574v1 Primary Assembly

    Range
    707862..714837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025214820.1 → XP_025070605.1  cystinosin

    UniProtKB/TrEMBL
    A0A3Q0HJ97
    Conserved Domains (1) summary
    TIGR00951
    Location:121 → 352
    2A43; Lysosomal Cystine Transporter
Nucleotide Protein
Heading Accession and Version

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