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COMT catechol-O-methyltransferase [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102371384, updated on 10-Mar-2024

Summary

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Gene symbol
COMT
Gene description
catechol-O-methyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See COMT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841997.1 (2496135..2531154)

NW_005841997.1Genomic Context describing neighboring genes Neighboring gene G protein subunit beta 1 like Neighboring gene thioredoxin reductase 2 Neighboring gene ARVCF delta catenin family member Neighboring gene transport and golgi organization 2 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841997 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catechol O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in catecholamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dopamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catechol O-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841997.1 Reference ASM45574v1 Primary Assembly

    Range
    2496135..2531154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014518936.2 → XP_014374422.1  catechol O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1U8CZF0
    Conserved Domains (1) summary
    COG4122
    Location:62 → 238
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]

  2. XM_025201508.1 → XP_025057293.1  catechol O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1U8CZF0
    Conserved Domains (1) summary
    COG4122
    Location:62 → 238
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]

  3. XM_014518941.2 → XP_014374427.1  catechol O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1U8CZF0
    Conserved Domains (1) summary
    COG4122
    Location:62 → 238
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]

  4. XM_025201509.1 → XP_025057294.1  catechol O-methyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3Q0GCG2

  5. XM_014518935.2 → XP_014374421.1  catechol O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1U8CZF0
    Conserved Domains (1) summary
    COG4122
    Location:62 → 238
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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