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LYPD6B LY6/PLAUR domain containing 6B [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102369240, updated on 10-Mar-2024

Summary

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Gene symbol
LYPD6B
Gene description
LY6/PLAUR domain containing 6B
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See LYPD6B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842691.1 (465084..535397)

NW_005842691.1Genomic Context describing neighboring genes Neighboring gene enhancer of polycomb homolog 2 Neighboring gene kinesin family member 5C Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene metabolism of cobalamin associated D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842691 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine receptor regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ly6/PLAUR domain-containing protein 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842691.1 Reference ASM45574v1 Primary Assembly

    Range
    465084..535397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025215988.1 → XP_025071773.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  2. XM_025215987.1 → XP_025071772.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  3. XM_025215986.1 → XP_025071771.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  4. XM_025215989.1 → XP_025071774.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  5. XM_025215985.1 → XP_025071770.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  6. XM_025215993.1 → XP_025071778.1  ly6/PLAUR domain-containing protein 6B isoform X5

    UniProtKB/TrEMBL
    A0A3Q0HMS6

  7. XM_025215992.1 → XP_025071777.1  ly6/PLAUR domain-containing protein 6B isoform X4

    UniProtKB/TrEMBL
    A0A3Q0HJE2

  8. XM_025215991.1 → XP_025071776.1  ly6/PLAUR domain-containing protein 6B isoform X3

    UniProtKB/TrEMBL
    A0A3Q0HII8

  9. XM_025215983.1 → XP_025071768.1  ly6/PLAUR domain-containing protein 6B isoform X1

    UniProtKB/TrEMBL
    A0A3Q0HMR8

  10. XM_025215984.1 → XP_025071769.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

  11. XM_025215990.1 → XP_025071775.1  ly6/PLAUR domain-containing protein 6B isoform X2

    UniProtKB/TrEMBL
    A0A1U7SE58
    Conserved Domains (1) summary
    pfam16975
    Location:40 → 144
    UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6
Nucleotide Protein
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