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FIG4 FIG4 phosphoinositide 5-phosphatase [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102369195, updated on 10-Mar-2024

Summary

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Gene symbol
FIG4
Gene description
FIG4 phosphoinositide 5-phosphatase
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See FIG4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841930.1 (3385238..3520176, complement)

NW_005841930.1Genomic Context describing neighboring genes Neighboring gene WASP family member 1 Neighboring gene G protein-coupled receptor 6 Neighboring gene adenylate kinase 9 Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene zinc finger and BTB domain containing 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841930 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyphosphoinositide phosphatase
Names
FIG4 homolog, SAC1 lipid phosphatase domain containing

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841930.1 Reference ASM45574v1 Primary Assembly

    Range
    3385238..3520176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006019496.3 → XP_006019558.1  polyphosphoinositide phosphatase isoform X1

    UniProtKB/TrEMBL
    A0A1U7RSJ9
    Conserved Domains (1) summary
    pfam02383
    Location:93 → 423
    Syja_N; SacI homology domain

  2. XM_025198844.1 → XP_025054629.1  polyphosphoinositide phosphatase isoform X2

    UniProtKB/TrEMBL
    A0A3Q0G4N2
    Conserved Domains (1) summary
    pfam02383
    Location:93 → 423
    Syja_N; SacI homology domain
Nucleotide Protein
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