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MSLN mesothelin [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102368124, updated on 10-Mar-2024

Summary

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Gene symbol
MSLN
Gene description
mesothelin
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See MSLN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842091.1 (525548..547480)

NW_005842091.1Genomic Context describing neighboring genes Neighboring gene hydroxyacylglutathione hydrolase, mitochondrial Neighboring gene hydroxyacylglutathione hydrolase like Neighboring gene cytosolic iron-sulfur assembly component 3 Neighboring gene mesothelin-like protein Neighboring gene uncharacterized LOC102382878

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842091 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mesothelin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842091.1 Reference ASM45574v1 Primary Assembly

    Range
    525548..547480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025204671.1 → XP_025060456.1  mesothelin

    UniProtKB/TrEMBL
    A0A3Q0GL58
    Conserved Domains (1) summary
    pfam06060
    Location:537 → 1099
    Mesothelin; Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)
Nucleotide Protein
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Gene LinkOut

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