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ALDH1A3 aldehyde dehydrogenase 1 family member A3 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102368111, updated on 10-Mar-2024

Summary

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Gene symbol
ALDH1A3
Gene description
aldehyde dehydrogenase 1 family member A3
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ALDH1A3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841946.1 (1116486..1166857)

NW_005841946.1Genomic Context describing neighboring genes Neighboring gene lines homolog 1 Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene leucine rich repeat kinase 1 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC102368347

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841946 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular aldehyde metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldehyde dehydrogenase family 1 member A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841946.1 Reference ASM45574v1 Primary Assembly

    Range
    1116486..1166857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006020070.3 → XP_006020132.1  aldehyde dehydrogenase family 1 member A3 isoform X2

    UniProtKB/TrEMBL
    A0A1U7RHH2
    Conserved Domains (1) summary
    cl11961
    Location:1 → 416
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  2. XM_025199601.1 → XP_025055386.1  aldehyde dehydrogenase family 1 member A3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G6U3
    Conserved Domains (1) summary
    cd07141
    Location:14 → 487
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
Nucleotide Protein
Heading Accession and Version

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