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OS9 OS9 endoplasmic reticulum lectin [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102367825, updated on 10-Mar-2024

Summary

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Gene symbol
OS9
Gene description
OS9 endoplasmic reticulum lectin
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See OS9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842961.1 (150789..156990, complement)

NW_005842961.1Genomic Context describing neighboring genes Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 1 Neighboring gene Rho guanine nucleotide exchange factor 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842961 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde protein transport, ER to cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein OS-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842961.1 Reference ASM45574v1 Primary Assembly

    Range
    150789..156990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025192696.1 → XP_025048481.1  protein OS-9

    UniProtKB/TrEMBL
    A0A3Q0FLG7
    Conserved Domains (3) summary
    pfam07174
    Location:250 → 312
    FAP; Fibronectin-attachment protein (FAP)
    pfam07915
    Location:77 → 148
    PRKCSH; Glucosidase II beta subunit-like protein
    cl06793
    Location:142 → 200
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein
Heading Accession and Version

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