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GAL3ST4 galactose-3-O-sulfotransferase 4 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102367290, updated on 10-Oct-2024

Summary

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Gene symbol
GAL3ST4
Gene description
galactose-3-O-sulfotransferase 4
See related
Ensembl:ENSLACG00000005377
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See GAL3ST4 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 30 NC_088168.1 (6376207..6430425, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005821791.1 (167280..220606, complement)

Chromosome 30 - NC_088168.1Genomic Context describing neighboring genes Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA asparagine (anticodon GUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088168.1 Reference fLatCha1.pri

    Range
    6376207..6430425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006011546.1 → XP_006011608.1  galactose-3-O-sulfotransferase 4

    See identical proteins and their annotated locations for XP_006011608.1

    UniProtKB/TrEMBL
    H3A8T5, H3A8T6
    Related
    ENSLACP00000006056.1, ENSLACT00000006108.1
    Conserved Domains (1) summary
    cl22970
    Location:15 → 393
    Sulfotransfer_2; Sulfotransferase family

  2. XM_014498047.1 → XP_014353533.1  galactose-3-O-sulfotransferase 4

    UniProtKB/TrEMBL
    H3A8T5, H3A8T6
    Conserved Domains (1) summary
    cl22970
    Location:15 → 393
    Sulfotransfer_2; Sulfotransferase family

  3. XM_064553035.1 → XP_064409105.1  galactose-3-O-sulfotransferase 4

    UniProtKB/TrEMBL
    H3A8T5

  4. XM_064553034.1 → XP_064409104.1  galactose-3-O-sulfotransferase 4

    UniProtKB/TrEMBL
    H3A8T5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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