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MGAT1B alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102366347, updated on 30-Apr-2024

Summary

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Gene symbol
MGAT1B
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b
See related
Ensembl:ENSLACG00000009723
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
MGAT1
Orthologs
zebrafish all
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Genomic context

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See MGAT1B in Genome Data Viewer
Location:
chromosome: 26
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 26 NC_088164.1 (11793805..11837160)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819442.1 (405561..447008)

Chromosome 26 - NC_088164.1Genomic Context describing neighboring genes Neighboring gene SH3-binding domain protein 5-like, b Neighboring gene general transcription factor IIH, polypeptide 4 Neighboring gene uncharacterized LOC106703909 Neighboring gene 5S ribosomal RNA Neighboring gene ribosomal protein S5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b
Names
mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088164.1 Reference fLatCha1.pri

    Range
    11793805..11837160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005998113.3 → XP_005998175.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b

    See identical proteins and their annotated locations for XP_005998175.1

    UniProtKB/TrEMBL
    H3AN27
    Conserved Domains (1) summary
    cl11394
    Location:10 → 444
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_005998114.3 → XP_005998176.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b

    See identical proteins and their annotated locations for XP_005998176.1

    UniProtKB/TrEMBL
    H3AN27
    Related
    ENSLACP00000011048.1
    Conserved Domains (1) summary
    cl11394
    Location:10 → 444
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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