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HAGH hydroxyacylglutathione hydrolase [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365938, updated on 26-Apr-2024

Summary

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Gene symbol
HAGH
Gene description
hydroxyacylglutathione hydrolase
See related
Ensembl:ENSLACG00000003240
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See HAGH in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 5 NC_088143.1 (105660997..105684315, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819903.1 (75557..99755, complement)

Chromosome 5 - NC_088143.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene nuclear prelamin A recognition factor-like Neighboring gene fumarylacetoacetate hydrolase domain containing 1 Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxyacylglutathione hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyacylglutathione hydrolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088143.1 Reference fLatCha1.pri

    Range
    105660997..105684315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006003088.3 → XP_006003150.1  hydroxyacylglutathione hydrolase, mitochondrial

    UniProtKB/TrEMBL
    H3A1W6
    Related
    ENSLACP00000003637.1
    Conserved Domains (3) summary
    PLN02469
    Location:45 → 300
    PLN02469; hydroxyacylglutathione hydrolase
    pfam16123
    Location:218 → 297
    HAGH_C; Hydroxyacylglutathione hydrolase C-terminus
    cd07723
    Location:50 → 217
    hydroxyacylglutathione_hydrolase_MBL-fold; hydroxyacylglutathione hydrolase, MBL-fold metallo-hydrolase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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