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LOC102365931 ribose-phosphate pyrophosphokinase 1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365931, updated on 26-Apr-2024

Summary

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Gene symbol
LOC102365931
Gene description
ribose-phosphate pyrophosphokinase 1
See related
Ensembl:ENSLACG00000004388
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
PRPS1
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Genomic context

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See LOC102365931 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 15 NC_088153.1 (27940559..27975813)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819698.1 (123764..156320, complement)

Chromosome 15 - NC_088153.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 41 Neighboring gene FERM and PDZ domain containing 3 Neighboring gene solute carrier family 25 member 53 Neighboring gene uncharacterized LOC102365759

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-phosphoribose 1-diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribonucleoside monophosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribose phosphate diphosphokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribose-phosphate pyrophosphokinase 1
Names
phosphoribosyl pyrophosphate synthetase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088153.1 Reference fLatCha1.pri

    Range
    27940559..27975813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006001304.3 → XP_006001366.1  ribose-phosphate pyrophosphokinase 1

    UniProtKB/TrEMBL
    H3A5L2
    Related
    ENSLACP00000004933.1
    Conserved Domains (3) summary
    COG0462
    Location:22 → 334
    PrsA; Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism, Amino acid transport and metabolism]
    pfam13793
    Location:25 → 141
    Pribosyltran_N; N-terminal domain of ribose phosphate pyrophosphokinase
    cl00309
    Location:182 → 334
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain
Nucleotide Protein
Heading Accession and Version

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