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RPE ribulose-5-phosphate-3-epimerase [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365672, updated on 6-Jun-2024

Summary

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Gene symbol
RPE
Gene description
ribulose-5-phosphate-3-epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
zebrafish all
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Genomic context

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See RPE in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 9 NC_088147.1 (25859840..25878897)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819555.1 (59580..78369, complement)

Chromosome 9 - NC_088147.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein 2 Neighboring gene unc-80 homolog, NALCN channel complex subunit Neighboring gene uncharacterized LOC102364474 Neighboring gene KAT8 regulatory NSL complex subunit 1-like Neighboring gene uncharacterized LOC106705493 Neighboring gene acyl-CoA dehydrogenase long chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribulose-phosphate 3-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribulose-phosphate 3-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088147.1 Reference fLatCha1.pri

    Range
    25859840..25878897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064563480.1 → XP_064419550.1  ribulose-phosphate 3-epimerase isoform X1

    UniProtKB/TrEMBL
    H3A0F4

  2. XM_064563481.1 → XP_064419551.1  ribulose-phosphate 3-epimerase isoform X2

    UniProtKB/TrEMBL
    H3A0F4
Nucleotide Protein
Heading Accession and Version

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