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PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365637, updated on 4-May-2024

Summary

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Gene symbol
PRKAA2
Gene description
protein kinase, AMP-activated, alpha 2 catalytic subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See PRKAA2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 6 NC_088144.1 (22615344..22682936)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005821786.1 (180006..242564)

Chromosome 6 - NC_088144.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 24 Neighboring gene FYN-binding protein 2 Neighboring gene phospholipid phosphatase 3 Neighboring gene complement component 8, alpha polypeptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP-activated protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-AMP-activated protein kinase catalytic subunit alpha-2
Names
protein kinase AMP-activated catalytic subunit alpha 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088144.1 Reference fLatCha1.pri

    Range
    22615344..22682936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064559842.1 → XP_064415912.1  5'-AMP-activated protein kinase catalytic subunit alpha-2 isoform X1

  2. XM_064559843.1 → XP_064415913.1  5'-AMP-activated protein kinase catalytic subunit alpha-2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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