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INPP5D inositol polyphosphate-5-phosphatase D [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365596, updated on 6-Jun-2024

Summary

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Gene symbol
INPP5D
Gene description
inositol polyphosphate-5-phosphatase D
See related
Ensembl:ENSLACG00000013057
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See INPP5D in Genome Data Viewer
Location:
chromosome: 8
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 8 NC_088146.1 (43695115..43802575, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819892.1 (775441..882843)

Chromosome 8 - NC_088146.1Genomic Context describing neighboring genes Neighboring gene small Cajal body-specific RNA 6 Neighboring gene ATG16 autophagy related 16-like 1 (S. cerevisiae) Neighboring gene small Cajal body-specific RNA 6 Neighboring gene sialidase-2 Neighboring gene integrin-linked kinase-associated serine/threonine phosphatase Neighboring gene uncharacterized LOC102362604

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of neutrophil differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of B cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
Names
inositol polyphosphate-5-phosphatase, 145kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088146.1 Reference fLatCha1.pri

    Range
    43695115..43802575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064563004.1 → XP_064419074.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

    UniProtKB/TrEMBL
    H3AYV9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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