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BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102364931, updated on 30-Apr-2024

Summary

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Gene symbol
BCKDHA
Gene description
branched chain keto acid dehydrogenase E1 subunit alpha
See related
Ensembl:ENSLACG00000018245
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See BCKDHA in Genome Data Viewer
Location:
chromosome: 29
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 29 NC_088167.1 (2917302..2929915)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819027.1 (2935163..2947062)

Chromosome 29 - NC_088167.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 91 Neighboring gene exosome component 5 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like Neighboring gene distal membrane arm assembly component 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
Names
branched chain keto acid dehydrogenase E1, alpha polypeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088167.1 Reference fLatCha1.pri

    Range
    2917302..2929915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014493614.2 → XP_014349100.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X1

    UniProtKB/TrEMBL
    H3BFU7
    Related
    ENSLACP00000020768.1

  2. XM_005987864.3 → XP_005987926.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X2

    Conserved Domains (1) summary
    cd02000
    Location:24 → 316
    TPP_E1_PDC_ADC_BCADC; Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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